I'm hoping to change that.
Aside from Rothia mucilaginosa and possibly Neisseria cinerea, nothing looks significantly low here. Is there anything else (Prevotella, Actinomyces, etc.) that really is strikingly low, (like <5% of the midpoint of the normal range)? or just a wide variety of bacteria, each of which is toward the lower end of normal but with none in particular standing out?
I'd suspect that your problem really were missing microbes, there'd be some genera/species that are totally or near-totally missing. If there really is an empty niche for something you have at, say, 25% of normal, then it should be able to expand to fill it within well under a day. It's also possible that you're missing specific strains more than specific species.
Thank you. Please find the full results below:
Neisseria subflava: 8.8% (normal range 1.1–14.9%)
Streptococcus mitis: 8.0% (0–4.7%)
Gemella sanguinis: 5.0% (0.2–1.9%)
Streptococcus oralis: 4.5% (0.1–2.3%)
Haemophilus parainfluenzae: 4.1% (1.1–8.4%)
Streptococcus pneumoniae: 3.5% (0–1.2%)
Granulicatella adiacens: 3.3% (0.3–1.8%)
Actinomyces sp. oral taxon 169: 2.9% (0–0.7%)
Rothia mucilaginosa: 2.7% (3.9–21.0%)
Actinomyces oris: 2.6% (0–1%)
Neisseria mucosa: 2.5% (0.06–1.6%)
Veillonella rogosae: 2.5% (0.4–4.1%)
Prevotella sp. oral taxon 299: 2.5% (0–1.2%)
Neisseria sp. RH3002v2g: 2.3% (0–1.6%)
Streptococcus sp. A12: 2.1% (0.09–1.2%)
Streptococcus sanguinis: 1.9% (0.04–1.2%)
Streptococcus australis: 1.8% (0.1–1.3%)
Streptococcus sp. Marseille-Q3533: 1.8% (0.1–1.7%)
Schaalia odontolytica: 1.8% (1.8–9.6%)
Gemella haemolysans: 1.6% (0–1.1%)
Neisseria perflava: 1.3% (0–1.4%)
Neisseria sp. Marseille-Q5346: 1.3% (0.03–1.5%)
Streptococcus sp. Marseille-Q6470: 1.2% (0.2–1.1%)
Rothia dentocariosa: 1.2% (0–1.7%)
Haemophilus haemolyticus: 1.1% (0–0.6%)
Streptococcus sp. oral taxon 061: 1.1% (0.2–1.3%)
Rothia aeria: 1.0% (0–0.7%)
Neisseria sicca: 1.0% (0.06–1.3%)
Neisseria meningitidis: 0.9% (0.07–0.6%)
Streptococcus sp. oral taxon 431: 0.9% (0.1–1.4%)
Streptococcus gwangjuense: 0.8% (0–0.3%)
Fusobacterium pseudoperiodonticum: 0.8% (0–1.9%)
Actinomyces sp. HMT 175: 0.8% (0–0.2%)
Streptococcus toyakuensis: 0.7% (0–0.4%)
Streptococcus ilei: 0.7% (0–1.6%)
Capnocytophaga gingivalis: 0.7% (0.003–0.5%)
Streptococcus sp. D7B5: 0.7% (0–0.1%)
Haemophilus sp. oral taxon 036: 0.7% (0–0.4%)
Streptococcus pseudopneumoniae: 0.6% (0–0.2%)
Haemophilus influenzae: 0.6% (0–0.4%)
Candidatus Nanosynbacter sp. HMT-352: 0.6% (0–8.2%)
Neisseria macacae: 0.6% (0–0.5%)
Streptococcus sp. 116-D4: 0.5% (0–0.2%)
Streptococcus sp. oral taxon 064: 0.5% (0–0.1%)
Streptococcus infantis: 0.5% (0.1–0.7%)
Streptococcus sp. NPS 308: 0.5% (0.003–0.1%)
Gemella morbillorum: 0.4% (0–0.4%)
Streptococcus parasanguinis: 0.4% (0.03–2.9%)
Streptococcus rubneri: 0.4% (0–1%)
Neisseria flavescens: 0.4% (0.02–0.5%)
Streptococcus koreensis: 0.4% (0–0.7%)
Porphyromonas sp. oral taxon 275: 0.4% (0–0.4%)
Veillonella parvula: 0.4% (0.04–1.3%)
Eikenella corrodens: 0.3% (0–0.2%)
Abiotrophia defectiva: 0.3% (0–0.3%)
Actinomyces pacaensis: 0.3% (0–1%)
Actinomyces naeslundii: 0.3% (0–0.5%)
Streptococcus gordonii: 0.3% (0–0.6%)
Veillonella nakazawae: 0.3% (0.3–2.0%)
Capnocytophaga sputigena: 0.2% (0–0.3%)
Leptotrichia sp. oral taxon 212: 0.2% (0–0.6%)
Cardiobacterium hominis: 0.2% (0–0.2%)
Streptococcus cristatus: 0.2% (0–0.5%)
Streptococcus agalactiae: 0.2% (0–0.09%)
Parvimonas micra: 0.2% (0–0.3%)
Streptococcus sp. 1643: 0.2% (0.003–0.08%)
Actinomyces sp. oral taxon 171: 0.2% (0–0.3%)
Morococcus cerebrosus: 0.2% (0–0.2%)
Neisseria lactamica: 0.2% (0–0.1%)
Veillonella sp. S12025-13: 0.2% (0.2–1.0%)
Fusobacterium nucleatum: 0.2% (0–0.2%)
Campylobacter concisus: 0.2% (0.1–2.1%)
Streptococcus salivarius: 0.1% (0.2–9.1%)
Streptococcus sp. LPB0220: 0.1% (normal range 0–3.1%)
Streptococcus anginosus: 0.1% (0.02–0.1%)
Porphyromonas endodontalis: 0.1% (0–0.8%)
Fusobacterium periodonticum: 0.1% (0–0.2%)
Streptococcus sp. HSISM1: 0.1% (0–2.6%)
Neisseria elongata: 0.1% (0–0.6%)
Aggregatibacter segnis: 0.1% (0–0.1%)
Lancefieldella parvula: 0.1% (0.06–1.3%)
Arachnia propionica: 0.1% (0–0.2%)
Prevotella melaninogenica: 0.1% (0.2–10.9%)
Corynebacterium durum: 0.1% (0–0.2%)
Capnocytophaga sp. FDAARGOS737: 0.1% (0–0.5%)
Veillonella dispar: 0.1% (0–1.1%)
Lachnoanaerobaculum gingivalis: 0.1% (0.04–0.3%)
Kingella oralis: 0.1% (0–0.2%)
Neisseria gonorrhoeae: 0.1% (0–0.2%)
Candidatus Minimicrobia vallesae: 0.1% (0–0.6%)
Lautropia mirabilis: 0.1% (0–1.1%)
Pauljensenia hongkongensis: 0.09% (0.01–0.1%)
Fusobacterium polymorphum: 0.09% (0–0.2%)
Prevotella intermedia: 0.08% (0.05–0.5%)
Veillonella atypica: 0.09% (0.05–4.2%)
Neisseria sp. Marseille-Q6792: 0.08% (0–0.2%)
Candidatus Nanosynbacter lyticus: 0.08% (0–0.2%)
Fusobacterium hwasookii: 0.07% (0–0.05%)
Neisseria sp. oral taxon 014: 0.08% (0–0.4%)
Capnocytophaga leadbetteri: 0.07% (0–0.4%)
Aggregatibacter sp. 2125159857: 0.07% (0–0.3%)
Actinomyces viscosus: 0.06% (0.006–0.03%)
Corynebacterium matruchotii: 0.06% (0–0.4%)
Eikenella exigua: 0.07% (0–0.03%)
Campylobacter showae: 0.06% (0–0.4%)
Neisseria cinerea: 0.07% (0–0.7%)
Prevotella nigrescens: 0.05% (0–2.3%)
Prevotella sp. oral taxon 475: 0.05% (0–0.09%)
Cardiobacterium sp. Marseille-Q4385: 0.05% (0–0.1%)
Prevotella bivia: 0.06% (0–0.1%)
Neisseria polysaccharea: 0.05% (0–0.06%)
Streptococcus lactarius: 0.06% (0–0.3%)
Haemophilus parahaemolyticus: 0.06% (0–0.3%)
Aggregatibacter sp. Marseille-P9115: 0.05% (0–0.1%)
Aggregatibacter sp. oral taxon 513: 0.06% (0–0.2%)
Streptococcus thermophilus: 0.05% (0.01–0.1%)
Tannerella serpentiformis: 0.05% (0–1.1%)
Capnocytophaga endodontalis: 0.04% (0–0.05%)
Ottowia sp. oral taxon 894: 0.05% (0–0.1%)
Aggregatibacter aphrophilus: 0.05% (0–0.2%)
Lachnoanaerobaculum umeaense: 0.04% (0–0.2%)
Neisseria sp. KEM232: 0.04% (0–0.08%)
Bibersteinia trehalosi: 0.04% (not detected)
Streptococcus intermedius: 0.04% (0–0.1%)
Streptococcus sp. LPB0220: 0.1% (normal range 0–3.1%)
Streptococcus anginosus: 0.1% (0.02–0.1%)
Porphyromonas endodontalis: 0.1% (0–0.8%)
Fusobacterium periodonticum: 0.1% (0–0.2%)
Streptococcus sp. HSISM1: 0.1% (0–2.6%)
Neisseria elongata: 0.1% (0–0.6%)
Aggregatibacter segnis: 0.1% (0–0.1%)
Lancefieldella parvula: 0.1% (0.06–1.3%)
Arachnia propionica: 0.1% (0–0.2%)
Prevotella melaninogenica: 0.1% (0.2–10.9%)
Corynebacterium durum: 0.1% (0–0.2%)
Capnocytophaga sp. FDAARGOS737: 0.1% (0–0.5%)
Veillonella dispar: 0.1% (0–1.1%)
Lachnoanaerobaculum gingivalis: 0.1% (0.04–0.3%)
Kingella oralis: 0.1% (0–0.2%)
Neisseria gonorrhoeae: 0.1% (0–0.2%)
Candidatus Minimicrobia vallesae: 0.1% (0–0.6%)
Lautropia mirabilis: 0.1% (0–1.1%)
Pauljensenia hongkongensis: 0.09% (0.01–0.1%)
Fusobacterium polymorphum: 0.09% (0–0.2%)
Prevotella intermedia: 0.08% (0.05–0.5%)
Veillonella atypica: 0.09% (0.05–4.2%)
Neisseria sp. Marseille-Q6792: 0.08% (0–0.2%)
Candidatus Nanosynbacter lyticus: 0.08% (0–0.2%)
Fusobacterium hwasookii: 0.07% (0–0.05%)
Neisseria sp. oral taxon 014: 0.08% (0–0.4%)
Capnocytophaga leadbetteri: 0.07% (0–0.4%)
Aggregatibacter sp. 2125159857: 0.07% (0–0.3%)
Actinomyces viscosus: 0.06% (0.006–0.03%)
Corynebacterium matruchotii: 0.06% (0–0.4%)
Eikenella exigua: 0.07% (0–0.03%)
Campylobacter showae: 0.06% (0–0.4%)
Neisseria cinerea: 0.07% (0–0.7%)
Prevotella nigrescens: 0.05% (0–2.3%)
Prevotella sp. oral taxon 475: 0.05% (0–0.09%)
Cardiobacterium sp. Marseille-Q4385: 0.05% (0–0.1%)
Prevotella bivia: 0.06% (0–0.1%)
Neisseria polysaccharea: 0.05% (0–0.06%)
Streptococcus lactarius: 0.06% (0–0.3%)
Haemophilus parahaemolyticus: 0.06% (0–0.3%)
Aggregatibacter sp. Marseille-P9115: 0.05% (0–0.1%)
Aggregatibacter sp. oral taxon 513: 0.06% (0–0.2%)
Streptococcus thermophilus: 0.05% (0.01–0.1%)
Tannerella serpentiformis: 0.05% (0–1.1%)
Capnocytophaga endodontalis: 0.04% (0–0.05%)
Ottowia sp. oral taxon 894: 0.05% (0–0.1%)
Aggregatibacter aphrophilus: 0.05% (0–0.2%)
Lachnoanaerobaculum umeaense: 0.04% (0–0.2%)
Neisseria sp. KEM232: 0.04% (0–0.08%)
Bibersteinia trehalosi: 0.04% (not detected)
Streptococcus intermedius: 0.04% (0–0.1%)
Weissella cibaria: 0.04% (not detected)
Streptococcus suis: 0.04% (0.001–0.01%)
Schaalia meyeri: 0.04% (0.03–0.3%)
Streptococcus constellatus: 0.04% (0–0.07%)
Granulicatella elegans: 0.05% (0–0.2%)
Mogibacterium diversum: 0.04% (0.01–0.7%)
Capnocytophaga ochracea: 0.03% (0–0.1%)
Porphyromonas gingivalis: 0.04% (0–0.3%)
Fusobacterium animalis: 0.03% (0–0.2%)
Streptococcus dysgalactiae: 0.03% (0–0.03%)
Streptococcus vestibularis: 0.03% (0–0.2%)
Hoylesella loescheii: 0.03% (0–0.2%)
Prevotella denticola: 0.02% (0–1.1%)
Capnocytophaga sp. oral taxon 878: 0.02% (0–0.05%)
Arachnia rubra: 0.02% (0–0.09%)
Actinobacillus equuli: 0.02% (0–0.006%)
Fusobacterium canifelinum: 0.02% (0–0.01%)
Fusobacterium sp. oral taxon 203: 0.02% (0–0.03%)
Kingella denitrificans: 0.02% (0–0.4%)
Streptococcus parasuis: 0.02% (0–0.005%)
Hoylesella pleuritidis: 0.02% (0–0.2%)
Streptococcus sp. FDAARGOS192: 0.02% (0–0.3%)
Haemophilus pittmaniae: 0.02% (0–0.08%)
Fusobacterium vincentii: 0.02% (0–0.1%)
Streptococcus milleri: 0.02% (0–0.03%)
Mannheimia varigena: 0.02% (not detected)
Streptococcus mutans: 0.02% (0–0.2%)
Bacteroides heparinolyticus: 0.02% (0–0.02%)
Neisseria bacilliformis: 0.02% (0–0.1%)
Actinomyces israelii: 0.009% (0–0.08%)
Leyella stercorea: 0.01% (0–0.007%)
Prevotella jejuni: 0.009% (0–4.9%)
Prevotella histicola: 0.01% (0–3.0%)
Prevotella veroralis: 0.02% (0–2.1%)
Prevotella oris: 0.02% (0–0.9%)
Neisseria shayeganii: 0.006% (not detected)
Neisseria dumasiana: 0.006% (not detected)
Streptococcus respiraculi: 0.006% (not detected)
Streptococcus oriscaviae: 0.006% (not detected)
Streptococcus pyogenes: 0.01% (0–0.4%)
Streptococcus pluranimalium: 0.006% (not detected)
Streptococcus equinus: 0.01% (not detected)
Simonsiella muelleri: 0.007% (0–0.01%)
Streptococcus marmotae: 0.007% (not detected)
Streptococcus himalayensis: 0.006% (not detected)
Streptococcus equi: 0.009% (0–0.01%)
Leptotrichia hofstadii: 0.007% (0–0.05%)
Schaalia cardiffensis: 0.006% (0–0.02%)
Actinomyces capricornis: 0.007% (not detected)
Actinomyces sp. oral taxon 414: 0.009% (0–0.3%)
Bulleidia sp. zg-1006: 0.01% (0–0.02%)
Filifactor alocis: 0.01% (0–0.08%)
Selenomonas sp. oral taxon 136: 0.008% (0–0.5%)
Neisseria yangbaofengii: 0.01% (0–0.007%)
Neisseria lisongii: 0.008% (0–0.003%)
Neisseria sp. KH1003-01: 0.006% (0–0.02%)
Selenomonas sp. oral taxon 478: 0.01% (0–0.7%)
Veillonella rodentium: 0.009% (0.002–0.03%)
Streptococcus alactolyticus: 0.007% (not detected)
Neisseria animalis: 0.01% (not detected)
Neisseria brasiliensis: 0.01% (0–0.005%)
Neisseria animaloris: 0.01% (not detected)
Neisseria chenwenguii: 0.008% (not detected)
Neisseria dentiae: 0.007% (not detected)
Neisseria weixii: 0.007% (not detected)
Neisseria weaveri: 0.007% (0–0.004%)
Neisseria wadsworthii: 0.006% (not detected)
Tannerella forsythia: 0.007% (0–0.3%)
Porphyromonas somerae: 0.006% (0–0.007%)
Porphyromonas cangingivalis: 0.006% (0–0.006%)
Porphyromonas asaccharolytica: 0.007% (0–0.01%)
Pseudoprevotella muciniphila: 0.006% (0–0.006%)
Prevotella buccae: 0.01% (0–0.07%)
Prevotella scopos: 0.007% (0.008–0.2%)
Prevotella baroniae: 0.006% (0–0.04%)
Prevotella corporis: 0.009% (0.003–0.1%)
Leptotrichia wadei: 0.006% (0–1%)
Pseudoleptotrichia goodfellowii: 0.009% (0–0.02%)
Campylobacter rectus: 0.01% (0–0.1%)
Treponema pedis: 0.005% (not detected)
Treponema denticola: 0.009% (0–0.1%)
Schaalia turicensis: 0.006% (0–0.03%)
Aggregatibacter actinomycetemcomitans: 0.005% (0–0.09%)
Actinobacillus porcitonsillarum: 0.01% (not detected)
Actinobacillus genomosp. 1: 0.009% (not detected)
Actinobacillus suis: 0.008% (not detected)
Mannheimia haemolytica: 0.01% (not detected)
Mannheimia granulomatis: 0.01% (not detected)
Pasteurella multocida: 0.007% (0–0.006%)
Candidatus Ornithobacterium hominis: 0.005% (0–0.01%)
Streptococcus uberis: 0.006% (not detected)
Burkholderia multivorans: 0.004% (0–0.003%)
Burkholderia vietnamiensis: 0.002% (not detected)
Leptotrichia trevisanii: 0.005% (0–0.05%)
Actinomyces radicidentis: 0.004% (0–0.003%)
Actinomyces slackii: 0.005% (not detected)
Caproicibacterium sp. BJN0003: 0.005% (not detected)
Barnesiella viscericola: 0.005% (not detected)
Prevotella fusca: 0.005% (0–0.06%)
Prevotella dentalis: 0.004% (0–0.02%)
Prevotella micans: 0.005% (0–0.03%)
Prevotella disiens: 0.005% (0.002–0.07%)
Hoylesella enoeca: 0.005% (0–0.1%)
Hoylesella timonensis: 0.005% (0–0.02%)
Hoylesella shahii: 0.005% (0–0.6%)
Haemophilus ducreyi: 0.005% (0–0.003%)
Neisseria canis: 0.003% (not detected)
Neisseria arctica: 0.004% (not detected)
Streptococcus sobrinus: 0.004% (not detected)
Neisseria musculi: 0.003% (not detected)
Streptococcus ferus: 0.005% (not detected)
Streptococcus merionis: 0.003% (not detected)
Actinobacillus indolicus: 0.005% (not detected)
Mogibacterium pumilum: 0.004% (0–0.04%)
Streptococcus canis: 0.004% (not detected)
Actinomyces howellii: 0.003% (0–0.002%)
Neisseria zalophi: 0.005% (not detected)
Leptotrichia hongkongensis: 0.005% (0–0.04%)
Glaesserella parasuis: 0.004% (not detected)
Fretibacterium fastidiosum: 0.003% (0–0.03%)
Actinomyces trachealis: 0.003% (0–0.004%)
Actinomyces respiraculi: 0.003% (not detected)
Prevotella ruminicola: 0.003% (not detected)
Segatella copri: 0.003% (not detected)
Hoylesella oralis: 0.003% (0–0.04%)
Streptococcus porcinus: 0.005% (0–0.003%)