Post Lyme Dysbiosis

footguy24

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Apr 15, 2026
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I was diagnosed with Lyme disease in 2010 and treated by a lyme literate physician for nearly two years. I had been ill for many years before figuring out the reason. I did reasonably well and was able to continue my medical practice for several years before retiring in 2013. I diagnosed one of my 6 daughters with Lyme disease and associated co-infections nearly 4 years ago. I treated her with a combination of I.V. and oral medications for several years. She initially did well but has since gotten to the point where she cant work and had to drop out of nursing school. I was involved for 6 months with a "Lyme Mentoring" program by zoom in which I participated on a weekly basis for 6 months. The Lyme expert teaching the program spent an entire session talking about FMT. At the time I thought it was interesting but had no idea how to proceed. Recently I searched the internet in pursuit of additional info about FMT and have read everything I can find about the science behind the procedure. My daughter is only in her early forties and suffers from high cortisol levels, hypertension, pre diabetes, sleep apnea, restless leg syndrome, uncontrollable weight gain and abdominal distress. several G.I. scope procedures have revealed nothing abnormal. I have been considering putting her back on an aggressive antibiotic protocol but dont feel that is really the right course of action. I am convinced that the only viable option for her if FMT.
I had been considering using a family member as a donor but dont want to pass on any genetic predisposition to the same thing my daughter is dealing with.
I would greatly appreciate any recommendations for moving to the next stage of possible treatment.

Sincerely,
B.T.
 
I have been considering putting her back on an aggressive antibiotic protocol but dont feel that is really the right course of action. I am convinced that the only viable option for her if FMT.

I 100% agree that FMT is a FAR more promising option than more of an aggressive antibiotic protocol. I was on antibiotics for Lyme for almost six years, four of them straight (continuous) under the care of a LLMD (the first two years where I was on and off were a combination of an infectious disease specialist and a pediatrician). All of the improvement was within the first year of care by the LLMD, the rest didn't help anything.

Then, years later, I was back on antibiotics for suspected Bartonella. This helped somewhat again as they were completely different antibiotics, however it was the FMT for C. diff that I acquired when going off this final course that was almost magic in what it did, far exceeding anything that those antibiotics did.

It is very difficult to tell the effect of Lyme and coinfections themselves from the effect of a damaged microbiome--and obviously antibiotics contribute to, not cure, the latter. Even if the same issues are present that originally emerged with Lyme, it's quite possible that now they're being driven by a damaged microbiome. That's something I learned way too late.

I had been considering using a family member as a donor but dont want to pass on any genetic predisposition to the same thing my daughter is dealing with.

Well, any Lyme and coinfections she had would obviously not be from her family. But it's quite possible that genetics and starting gut microbiome had something to do with the hypertension, diabetes, etc., even if the Lyme was the final stress that precipitated them.

Obviously, it's easier to use family members, especially if they live nearby, as you already know them and they are more likely to be willing. On the other hand, be open to the possibility that the best donors might be unrelated, and so don't give up just because related donors don't help.
 
My daughter is only in her early forties and suffers from high cortisol levels, hypertension, pre diabetes, sleep apnea, restless leg syndrome, uncontrollable weight gain and abdominal distress
The evidence in the wiki strongly suggests that these conditions all stem from gut dysbiosis, and thus FMT is the solution.

I would greatly appreciate any recommendations for moving to the next stage of possible treatment.
You'll have to read this and get involved: https://forum.humanmicrobiome.info/threads/the-fda-and-fmt-regulation-part-2-jul-2024-humanmicrobes-org-i-met-wit.520/post-1370. We need more doctors getting involved, taking action, and recruiting others.

Antibiotics are not a solution https://humanmicrobiome.info/antibiotics.
 
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